Index

A

add_subplot() (biomechzoo.ensembler.ensembler.Ensembler method) addchannel_data() (in module biomechzoo.processing.addchannel_data)

addevent_data() (in module biomechzoo.processing.addevent_data) align_by_subject() (in module biomechzoo.ensembler.helpers) all_conditions (biomechzoo.ensembler.plot_spec.PlotSpec property)

B

base_channels (biomechzoo.ensembler.helpers.ConditionSpec attribute) batchdisp() (in module biomechzoo.utils.batchdisp) BETWEEN (biomechzoo.ensembler.helpers.ConditionSource attribute) biomechzoo.biomech_ops.continuous_relative_phase_data module biomechzoo.biomech_ops.continuous_relative_phase_line module biomechzoo.biomech_ops.filter_data module biomechzoo.biomech_ops.filter_line module biomechzoo.biomech_ops.movement_onset module biomechzoo.biomech_ops.normalize_data module biomechzoo.biomech_ops.normalize_line module biomechzoo.biomech_ops.phase_angle_data module biomechzoo.biomech_ops.phase_angle_line module biomechzoo.biomech_ops.resample module biomechzoo.conversion.c3d2zoo_data module biomechzoo.conversion.mvnx2zoo_data module biomechzoo.conversion.opencap2zoo_data module biomechzoo.conversion.table2zoo_data module biomechzoo.ensembler.data_store module biomechzoo.ensembler.helpers module biomechzoo.ensembler.style_content module biomechzoo.imu.step_detection module biomechzoo.imu.tilt_algorithm module biomechzoo.linear_algebra_ops.compute_magnitude_data module biomechzoo.linear_algebra_ops.kinematics module biomechzoo.linear_algebra_ops.make_unit module biomechzoo.linear_algebra_ops.rectify module biomechzoo.processing.addchannel_data module biomechzoo.processing.addevent_data module biomechzoo.processing.combine_files_data module biomechzoo.processing.explodechannel_data module

biomechzoo.processing.partition_data module biomechzoo.processing.removechannel_data module biomechzoo.processing.removeevent_data module biomechzoo.processing.renamechannel_data module biomechzoo.processing.renameevent_data module biomechzoo.processing.rep_trial_data module biomechzoo.processing.split_trial_data module biomechzoo.processing.xsens_dot_csv_combine module biomechzoo.statistics.eventval module biomechzoo.statistics.lineval module biomechzoo.statistics.lineval_wide2arrays module biomechzoo.statistics.rmse module biomechzoo.utils.batchdisp module biomechzoo.utils.combine_xsens_csv module biomechzoo.utils.common_substring module biomechzoo.utils.compute_sampling_rate_from_time module biomechzoo.utils.engine module biomechzoo.utils.fileparts module biomechzoo.utils.findfield module biomechzoo.utils.get_split_events module biomechzoo.utils.group_by_terminal_folder module biomechzoo.utils.peak_sign module biomechzoo.utils.set_zoosystem module biomechzoo.utils.update_channel_list module biomechzoo.utils.version module biomechzoo.utils.zload module biomechzoo.utils.zplot module biomechzoo.utils.zsave module build() (biomechzoo.ensembler.ensembler.Ensembler method) bw_filter() (in module biomechzoo.biomech_ops.movement_onset)

C

c3d2zoo_data() (in module biomechzoo.conversion.c3d2zoo_data) channel (biomechzoo.ensembler.plot_spec.PlotSpec attribute) channel_map (biomechzoo.ensembler.helpers.ConditionSpec attribute) check_already_moving() (in module biomechzoo.biomech_ops.movement_onset) col (biomechzoo.ensembler.plot_spec.PlotSpec attribute) combine_files_between() (in module biomechzoo.processing.combine_files_data) combine_files_within() (in module biomechzoo.processing.combine_files_data) combine_imu_to_csv() (in module biomechzoo.processing.xsens_dot_csv_combine) combine_imu_to_csv_data() (in module biomechzoo.processing.xsens_dot_csv_combine) combine_quats_to_csv() (in module biomechzoo.processing.xsens_dot_csv_combine) (in module biomechzoo.utils.combine_xsens_csv) common_substring_join() (in module biomechzoo.utils.common_substring) companions (biomechzoo.ensembler.plot_spec.PlotSpec attribute) CompositeRenderer (class in biomechzoo.ensembler.renderers)

compute_ensemble() (in module biomechzoo.ensembler.helpers) compute_magnitude_data() (in module biomechzoo.linear_algebra_ops.compute_magnitude_data) compute_magnitude_line() (in module biomechzoo.linear_algebra_ops.compute_magnitude_data) (in module biomechzoo.linear_algebra_ops.rectify) compute_sampling_rate_from_time() (in module biomechzoo.utils.compute_sampling_rate_from_time) condition (biomechzoo.ensembler.plot_spec.PlotSpec attribute) condition_color() (biomechzoo.ensembler.style_content.StyleContext method) condition_dash() (biomechzoo.ensembler.style_content.StyleContext method) conditions (biomechzoo.ensembler.helpers.ConditionSpec attribute) ConditionSource (class in biomechzoo.ensembler.helpers) ConditionSpec (class in biomechzoo.ensembler.helpers) continuous_relative_phase_data() (in module biomechzoo.biomech_ops.continuous_relative_phase_data) continuous_relative_phase_line() (in module biomechzoo.biomech_ops.continuous_relative_phase_line) crash_catch() (in module biomechzoo.imu.step_detection)

D

DataStore (class in biomechzoo.ensembler.data_store)

dcms2euler_data() (in module biomechzoo.linear_algebra_ops.kinematics) detect_movement_onset() (in module biomechzoo.biomech_ops.movement_onset)

E

engine() (in module biomechzoo.utils.engine) Ensembler (class in biomechzoo.ensembler.ensembler) EventOverlayRenderer (class in biomechzoo.ensembler.renderers) events (biomechzoo.ensembler.plot_spec.PlotSpec attribute)

eventval() (in module biomechzoo.statistics.eventval) explodechannel_data() (in module biomechzoo.processing.explodechannel_data) extract_events() (in module biomechzoo.ensembler.helpers) extract_subject_id() (in module biomechzoo.ensembler.helpers)

F

fileparts() (in module biomechzoo.utils.fileparts) filter_data() (in module biomechzoo.biomech_ops.filter_data)

filter_line() (in module biomechzoo.biomech_ops.filter_line) find_first_peak() (in module biomechzoo.processing.addevent_data) findfield() (in module biomechzoo.utils.findfield)

G

get_biomechzoo_version() (in module biomechzoo.utils.version) get_event_subject_ids() (biomechzoo.ensembler.data_store.DataStore method) get_event_values() (biomechzoo.ensembler.data_store.DataStore method) get_events() (biomechzoo.ensembler.data_store.DataStore method) get_lines() (biomechzoo.ensembler.data_store.DataStore method)

get_split_events() (in module biomechzoo.utils.get_split_events) get_subject_ids() (biomechzoo.ensembler.data_store.DataStore method) group_by (biomechzoo.ensembler.plot_spec.PlotSpec attribute) group_by_terminal_folder() (in module biomechzoo.utils.group_by_terminal_folder) group_map (biomechzoo.ensembler.plot_spec.PlotSpec attribute)

I

imu_mcgrath() (in module biomechzoo.imu.step_detection)

IndividualLinesRenderer (class in biomechzoo.ensembler.renderers) is_valid_for_zoo() (in module biomechzoo.conversion.mvnx2zoo_data)

K

kt_butter() (in module biomechzoo.biomech_ops.filter_line)

L

lineval() (in module biomechzoo.statistics.lineval)

lineval_wide2arrays() (in module biomechzoo.statistics.lineval_wide2arrays)

M

make_unit() (in module biomechzoo.linear_algebra_ops.make_unit) marker2dcm_data() (in module biomechzoo.linear_algebra_ops.kinematics) match_condition() (in module biomechzoo.ensembler.helpers) MeanSDRenderer (class in biomechzoo.ensembler.renderers) module biomechzoo.biomech_ops.continuous_relative_phase_data biomechzoo.biomech_ops.continuous_relative_phase_line biomechzoo.biomech_ops.filter_data biomechzoo.biomech_ops.filter_line biomechzoo.biomech_ops.movement_onset biomechzoo.biomech_ops.normalize_data biomechzoo.biomech_ops.normalize_line biomechzoo.biomech_ops.phase_angle_data biomechzoo.biomech_ops.phase_angle_line biomechzoo.biomech_ops.resample biomechzoo.conversion.c3d2zoo_data biomechzoo.conversion.mvnx2zoo_data biomechzoo.conversion.opencap2zoo_data biomechzoo.conversion.table2zoo_data biomechzoo.ensembler.data_store biomechzoo.ensembler.helpers biomechzoo.ensembler.style_content biomechzoo.imu.step_detection biomechzoo.imu.tilt_algorithm biomechzoo.linear_algebra_ops.compute_magnitude_data biomechzoo.linear_algebra_ops.kinematics biomechzoo.linear_algebra_ops.make_unit biomechzoo.linear_algebra_ops.rectify biomechzoo.processing.addchannel_data biomechzoo.processing.addevent_data biomechzoo.processing.combine_files_data biomechzoo.processing.explodechannel_data biomechzoo.processing.partition_data biomechzoo.processing.removechannel_data biomechzoo.processing.removeevent_data biomechzoo.processing.renamechannel_data biomechzoo.processing.renameevent_data biomechzoo.processing.rep_trial_data biomechzoo.processing.split_trial_data biomechzoo.processing.xsens_dot_csv_combine biomechzoo.statistics.eventval biomechzoo.statistics.lineval biomechzoo.statistics.lineval_wide2arrays biomechzoo.statistics.rmse biomechzoo.utils.batchdisp biomechzoo.utils.combine_xsens_csv biomechzoo.utils.common_substring biomechzoo.utils.compute_sampling_rate_from_time biomechzoo.utils.engine biomechzoo.utils.fileparts biomechzoo.utils.findfield biomechzoo.utils.get_split_events biomechzoo.utils.group_by_terminal_folder biomechzoo.utils.peak_sign biomechzoo.utils.set_zoosystem biomechzoo.utils.update_channel_list biomechzoo.utils.version biomechzoo.utils.zload biomechzoo.utils.zplot biomechzoo.utils.zsave

movement_offset() (in module biomechzoo.biomech_ops.movement_onset) movement_onset() (in module biomechzoo.biomech_ops.movement_onset) mvnx2zoo_data() (in module biomechzoo.conversion.mvnx2zoo_data)

N

normalize_data() (in module biomechzoo.biomech_ops.normalize_data)

normalize_line() (in module biomechzoo.biomech_ops.normalize_line)

O

opencap2zoo_data() (in module biomechzoo.conversion.opencap2zoo_data)

P

partition_data() (in module biomechzoo.processing.partition_data) peak_sign() (in module biomechzoo.utils.peak_sign)

phase_angle_data() (in module biomechzoo.biomech_ops.phase_angle_data) phase_angle_line() (in module biomechzoo.biomech_ops.phase_angle_line) PlotSpec (class in biomechzoo.ensembler.plot_spec)

Q

quats2dcm_data() (in module biomechzoo.linear_algebra_ops.kinematics)

quats2euler_data() (in module biomechzoo.linear_algebra_ops.kinematics)

R

rectify_data() (in module biomechzoo.linear_algebra_ops.rectify) rectify_line() (in module biomechzoo.linear_algebra_ops.rectify) removechannel_data() (in module biomechzoo.processing.removechannel_data) removeevent_data() (in module biomechzoo.processing.removeevent_data) renamechannel_data() (in module biomechzoo.processing.renamechannel_data) renameevent_data() (in module biomechzoo.processing.renameevent_data) render() (biomechzoo.ensembler.renderers.CompositeRenderer method) (biomechzoo.ensembler.renderers.EventOverlayRenderer method) (biomechzoo.ensembler.renderers.IndividualLinesRenderer method) (biomechzoo.ensembler.renderers.MeanSDRenderer method)

renderer (biomechzoo.ensembler.plot_spec.PlotSpec attribute) reptrial_data() (in module biomechzoo.processing.rep_trial_data) resample_data() (in module biomechzoo.biomech_ops.resample) resolve_shade() (in module biomechzoo.ensembler.helpers) rmse() (in module biomechzoo.statistics.rmse) rotate_dcm_data() (in module biomechzoo.linear_algebra_ops.kinematics) row (biomechzoo.ensembler.plot_spec.PlotSpec attribute)

S

set_zoosystem() (in module biomechzoo.utils.set_zoosystem) should_show_legend() (biomechzoo.ensembler.style_content.StyleContext method) sliding_window_features() (in module biomechzoo.biomech_ops.movement_onset) source (biomechzoo.ensembler.helpers.ConditionSpec attribute)

split_trial_data() (in module biomechzoo.processing.split_trial_data) StyleContext (class in biomechzoo.ensembler.style_content) subject_color() (biomechzoo.ensembler.style_content.StyleContext method) suffix_map (biomechzoo.ensembler.helpers.ConditionSpec attribute)

T

table2zoo_data() (in module biomechzoo.conversion.table2zoo_data) tilt_algorithm_data() (in module biomechzoo.imu.tilt_algorithm) tilt_algorithm_line() (in module biomechzoo.imu.tilt_algorithm)

title (biomechzoo.ensembler.plot_spec.PlotSpec attribute) to_events_dataframe() (biomechzoo.ensembler.data_store.DataStore method) to_lines_dataframe() (biomechzoo.ensembler.data_store.DataStore method)

U

update_channel_list() (in module biomechzoo.utils.update_channel_list)

W

WITHIN (biomechzoo.ensembler.helpers.ConditionSource attribute)

X

x (biomechzoo.ensembler.helpers.ZooEvent attribute)

x_label (biomechzoo.ensembler.plot_spec.PlotSpec attribute)

Y

y (biomechzoo.ensembler.helpers.ZooEvent attribute)

y_label (biomechzoo.ensembler.plot_spec.PlotSpec attribute)

Z

zload() (in module biomechzoo.utils.zload) ZooEvent (class in biomechzoo.ensembler.helpers)

zplot() (in module biomechzoo.utils.zplot) zsave() (in module biomechzoo.utils.zsave)